LOC_Os04g33950.1 (E2FB, ATE2FB, E2F1,...)

Aliases : E2FB, ATE2FB, E2F1, LOC_Os04g33950

Description : E2F cell cycle interphase transcription factor. transcription factor (E2F/DP)

Gene families : OG0001575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001575_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g33950.1

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene05332.t2	E2FB, ATE2FB,...	E2F-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene25583.t1	E2FB, ATE2FB,...	E2F-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Len_g13317	E2FB, ATE2FB, E2F1	E2F-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g10441	E2FB, ATE2FB, E2F1	E2F-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g30048	E2FB, ATE2FB, E2F1	E2F-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g41526	E2FB, ATE2FB, E2F1	E2F-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005667	transcription regulator complex	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032198	E2F_CC-MB	219	318
IPR003316	E2F_WHTH_DNA-bd_dom	141	204

External Links

No external refs found!

LOC_Os04g33950.1 (E2FB, ATE2FB, E2F1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation