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  5. LOC_Os04g33830.1

LOC_Os04g33830.1 (PSAO, LOC_Os04g33830)


Aliases : PSAO, LOC_Os04g33830

Description : component PsaO of PS-I complex


Gene families : OG0006664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g33830.1
Cluster HCCA: Cluster_39

luster/view/45416" class="qtip_tooltip" qtip_href="/cluster/tooltip/45416">Cluster_39Azfi_s0069.g036525
Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00092490 PSAO,... Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.1 OrthoFinder output from all 47 species
AT1G08380 PSAO photosystem I subunit O 0.25 OrthoFinder output from all 47 species
Aev_g48685 PSAO component *(PsaO) of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g41969 PSAO component *(PsaO) of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Aspi01Gene33467.t1 PSAO, Aspi01Gene33467 component *(PsaO) of PS-I complex & original description: none 0.08 OrthoFinder output from all 47 species
PSAO component *(PsaO) of PS-I complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.30G021300.1 PSAO, Ceric.30G021300 component *(PsaO) of PS-I complex & original... 0.23 OrthoFinder output from all 47 species
Cre07.g334550 PSAO Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.21 OrthoFinder output from all 47 species
Dcu_g00367 PSAO component *(PsaO) of PS-I complex & original description: none 0.14 OrthoFinder output from all 47 species
Dde_g21922 PSAO component *(PsaO) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00560 PSAO component *(PsaO) of PS-I complex & original description: none 0.13 OrthoFinder output from all 47 species
GSVIVT01036077001 PSAO Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.14 OrthoFinder output from all 47 species
Gb_21299 PSAO component PsaO of PS-I complex 0.13 OrthoFinder output from all 47 species
Lfl_g36346 PSAO component *(PsaO) of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
MA_893g0010 PSAO no hits & (original description: none) 0.16 OrthoFinder output from all 47 species
Mp8g01210.1 PSAO component PsaO of PS-I complex 0.32 OrthoFinder output from all 47 species
Msp_g09112 PSAO not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g10106 PSAO component *(PsaO) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g44306 PSAO component *(PsaO) of PS-I complex & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g05428 PSAO component *(PsaO) of PS-I complex & original description: none 0.15 OrthoFinder output from all 47 species
Pnu_g20184 PSAO component *(PsaO) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g30709 No alias component *(PsaO) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g00362 No alias component *(PsaO) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019936 PSAO circadian clock activation factor *(LWD) & original... 0.11 OrthoFinder output from all 47 species
Sam_g30018 No alias component *(PsaO) of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Smo104218 PSAO Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.06 OrthoFinder output from all 47 species
Solyc06g074200.4.1 PSAO, Solyc06g074200 component PsaO of PS-I complex 0.29 OrthoFinder output from all 47 species
Spa_g11754 PSAO component *(PsaO) of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g11755 PSAO component *(PsaO) of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Tin_g00203 PSAO component *(PsaO) of PS-I complex & original description: none 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!