1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g27400.1

LOC_Os04g27400.1 (TPS02, LOC_Os04g27400)


Aliases : TPS02, LOC_Os04g27400

Description : mono-/sesquiterpene-/diterpene synthase


Gene families : OG0000499 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000499_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g27400.1
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT3G25820 ATTPS-CIN, TPS-CIN terpene synthase-like sequence-1,8-cineole 0.04 OrthoFinder output from all 47 species
AT3G25830 ATTPS-CIN, TPS-CIN terpene synthase-like sequence-1,8-cineole 0.04 OrthoFinder output from all 47 species
AT5G23960 ATTPS21, TPS21 terpene synthase 21 0.03 OrthoFinder output from all 47 species
GSVIVT01000402001 ATTPS-CIN, TPS-CIN Tricyclene synthase EBOS, chloroplastic OS=Lotus japonicus 0.03 OrthoFinder output from all 47 species
GSVIVT01013515001 ATTPS-CIN, TPS-CIN (-)-alpha-terpineol synthase OS=Vitis vinifera 0.05 OrthoFinder output from all 47 species
GSVIVT01036313001 ATTPS21, TPS21 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
GSVIVT01036348001 ATTPS21, TPS21 Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
GSVIVT01036373001 ATTPS21, TPS21 Valencene synthase OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
Gb_08213 TPS02 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Gb_10196 KS, KS1, ATKS1, ATKS, GA2 Bifunctional cis-abienol synthase, chloroplastic... 0.02 OrthoFinder output from all 47 species
Gb_11595 TPS10 mono-/sesquiterpene-/diterpene synthase 0.02 OrthoFinder output from all 47 species
Gb_11598 TPS10 mono-/sesquiterpene-/diterpene synthase 0.02 OrthoFinder output from all 47 species
Gb_11694 TPS03, ATTPS03 mono-/sesquiterpene-/diterpene synthase 0.02 OrthoFinder output from all 47 species
Gb_27156 No alias mono-/sesquiterpene-/diterpene synthase 0.02 OrthoFinder output from all 47 species
LOC_Os03g22634.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
LOC_Os03g24690.1 TPS02, LOC_Os03g24690 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
LOC_Os03g31430.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
LOC_Os04g27430.1 LOC_Os04g27430 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
LOC_Os04g27540.1 LOC_Os04g27540 mono-/sesquiterpene-/diterpene synthase 0.05 OrthoFinder output from all 47 species
LOC_Os04g27670.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
LOC_Os05g24500.1 LOC_Os05g24500 no description available(sp|q5gj59|tps7_maize : 201.0) &... 0.03 OrthoFinder output from all 47 species
LOC_Os08g04500.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
MA_10431788g0010 TPS03, ATTPS03 mono-/sesquiterpene-/diterpene synthase 0.02 OrthoFinder output from all 47 species
MA_10435148g0010 TPS03, ATTPS03 mono-/sesquiterpene-/diterpene synthase 0.02 OrthoFinder output from all 47 species
MA_136166g0010 TPS02 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
MA_177655g0010 TPS03, ATTPS03 Longifolene synthase OS=Picea abies... 0.02 OrthoFinder output from all 47 species
MA_5912150g0010 No alias Delta-selinene synthase OS=Abies grandis... 0.03 OrthoFinder output from all 47 species
Solyc06g060010.4.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.05 OrthoFinder output from all 47 species
Zm00001e001692_P001 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Zm00001e040149_P001 Zm00001e040149 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 2 154
IPR005630 Terpene_synthase_metal-bd 185 451
No external refs found!