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  5. LOC_Os04g19740.1

LOC_Os04g19740.1 (LOC_Os04g19740)


Aliases : LOC_Os04g19740

Description : transketolase. transketolase


Gene families : OG0001949 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001949_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os04g19740.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00268850 evm_27.TU.AmTr_v1... Carbohydrate metabolism.oxidative pentose phosphate... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00047610 evm_27.TU.AmTr_v1... Carbohydrate metabolism.oxidative pentose phosphate... 0.02 OrthoFinder output from all 47 species
Aspi01Gene53279.t1 Aspi01Gene53279 EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007897 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.04 OrthoFinder output from all 47 species
Azfi_s0375.g067262 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
Dde_g24663 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.04 OrthoFinder output from all 47 species
Lfl_g04960 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
Ore_g36534 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
Smo161485 No alias Carbohydrate metabolism.oxidative pentose phosphate... 0.02 OrthoFinder output from all 47 species
Smo268939 No alias Carbohydrate metabolism.oxidative pentose phosphate... 0.03 OrthoFinder output from all 47 species
Solyc01g018020.3.1 Solyc01g018020 transketolase. transketolase 0.03 OrthoFinder output from all 47 species
Tin_g01136 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
Zm00001e008529_P001 Zm00001e008529 transketolase. transketolase 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR005474 Transketolase_N 56 388
IPR005475 Transketolase-like_Pyr-bd 406 576
IPR033248 Transketolase_C 601 707
No external refs found!