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  5. LOC_Os04g16734.1

LOC_Os04g16734.1 (MATK, LOC_Os04g16734)


Aliases : MATK, LOC_Os04g16734

Description : maturase (MatK)


Gene families : OG0009239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g16734.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
ATCG00040 MATK maturase K 0.44 OrthoFinder output from all 47 species
Aev_g12869 MATK maturase *(MatK) & original description: none 0.24 OrthoFinder output from all 47 species
Ala_g16220 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g77943 No alias maturase *(MatK) & original description: none 0.16 OrthoFinder output from all 47 species
Ceric.02G011900.1 Ceric.02G011900 not classified & original description: pacid=50586159... 0.21 OrthoFinder output from all 47 species
Ceric.1Z023400.1 Ceric.1Z023400 not classified & original description: pacid=50586366... 0.04 OrthoFinder output from all 47 species
Ceric.1Z116700.1 Ceric.1Z116700 not classified & original description: pacid=50576996... 0.08 OrthoFinder output from all 47 species
Ceric.26G042300.1 Ceric.26G042300 not classified & original description: pacid=50599388... 0.1 OrthoFinder output from all 47 species
Ceric.29G005800.1 Ceric.29G005800 not classified & original description: pacid=50625652... 0.08 OrthoFinder output from all 47 species
Dde_g25162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020677001 No alias Maturase K OS=Vitis vinifera 0.15 OrthoFinder output from all 47 species
GSVIVT01022885001 MATK RNA processing.organelle machineries.RNA... 0.07 OrthoFinder output from all 47 species
Gb_01780 MATK maturase (MatK) 0.12 OrthoFinder output from all 47 species
Lfl_g12823 MATK maturase *(MatK) & original description: none 0.21 OrthoFinder output from all 47 species
Ore_g01567 MATK maturase *(MatK) & original description: none 0.15 OrthoFinder output from all 47 species
Pir_g14902 MATK not classified & original description: none 0.21 OrthoFinder output from all 47 species
Solyc00g500048.1.1 MATK, Solyc00g500048 maturase (MatK) 0.24 OrthoFinder output from all 47 species
Solyc00g500131.1.1 MATK, Solyc00g500131 maturase (MatK) 0.22 OrthoFinder output from all 47 species
Solyc00g500201.1.1 MATK, Solyc00g500201 maturase (MatK) 0.22 OrthoFinder output from all 47 species
Solyc00g500295.1.1 MATK, Solyc00g500295 maturase (MatK) 0.22 OrthoFinder output from all 47 species
Solyc00g500330.1.1 MATK, Solyc00g500330 maturase (MatK) 0.2 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR024937 Domain_X 395 517
IPR024942 Maturase_MatK_N 32 367
No external refs found!