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  5. LOC_Os04g13020.1

LOC_Os04g13020.1 (LOC_Os04g13020)


Aliases : LOC_Os04g13020

Description : no hits & (original description: none)


Gene families : OG0002640 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002640_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g13020.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g35470.1 LOC_Os01g35470 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g03240.1 LOC_Os03g03240 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os04g03950.1 LOC_Os04g03950 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os04g10190.1 LOC_Os04g10190 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g24080.1 LOC_Os04g24080 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os04g53270.1 LOC_Os04g53270 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g04430.1 LOC_Os05g04430 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g05010.1 LOC_Os05g05010 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g16680.1 LOC_Os05g16680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g30260.1 LOC_Os05g30260 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g31430.1 LOC_Os05g31430 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g14600.1 LOC_Os06g14600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g29750.1 LOC_Os06g29750 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os06g33260.1 LOC_Os06g33260 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g38410.1 LOC_Os06g38410 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g45530.1 LOC_Os06g45530 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g47370.1 LOC_Os06g47370 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os06g48450.1 LOC_Os06g48450 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g48460.1 LOC_Os06g48460 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os07g26800.1 LOC_Os07g26800 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os07g30570.1 LOC_Os07g30570 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g45660.1 LOC_Os07g45660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g10080.1 LOC_Os09g10080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g22350.1 LOC_Os09g22350 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g19120.1 LOC_Os10g19120 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g31600.1 LOC_Os10g31600 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g24920.1 LOC_Os11g24920 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os11g28690.1 LOC_Os11g28690 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os11g28720.1 LOC_Os11g28720 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g23910.1 LOC_Os12g23910 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g28200.1 LOC_Os12g28200 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os12g37330.1 LOC_Os12g37330 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!