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  5. LOC_Os04g09900.1

LOC_Os04g09900.1 (CPS, ATCPS1, ABC33,...)


Aliases : CPS, ATCPS1, ABC33, CPS1, GA1, LOC_Os04g09900

Description : ent-copalyl diphosphate synthase


Gene families : OG0000661 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g09900.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Adi_g024705 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068477 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g083446 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083447 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13824 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26788 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g64876 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g66815 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71568 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g78886 CPS, ATCPS1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g25280 KS, KS1, ATKS1, ATKS, GA2 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29132 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g29133 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39808 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43202 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08902 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10734 KS, KS1, ATKS1, ATKS, GA2 EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00720 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.02 OrthoFinder output from all 47 species
Gb_04666 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.06 OrthoFinder output from all 47 species
Gb_06621 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.04 OrthoFinder output from all 47 species
Gb_07328 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.03 OrthoFinder output from all 47 species
Gb_10531 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
Gb_13692 TPS02 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Gb_24873 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Gb_25663 TPS03, ATTPS03 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Gb_38468 No alias Monofunctional pimaradiene synthase OS=Pinus banksiana... 0.02 OrthoFinder output from all 47 species
Gb_38471 KS, KS1, ATKS1, ATKS, GA2 Alpha-bisabolene synthase OS=Abies grandis... 0.04 OrthoFinder output from all 47 species
Gb_38829 TPS02 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Gb_39995 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.06 OrthoFinder output from all 47 species
LOC_Os02g36264.1 KS, KS1, ATKS1,... ent-kaurene synthase 0.07 OrthoFinder output from all 47 species
LOC_Os11g28530.2 KS, KS1, ATKS1,... ent-kaurene synthase 0.05 OrthoFinder output from all 47 species
Len_g22132 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g41660 KS, KS1, ATKS1, ATKS, GA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10378945g0010 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.04 OrthoFinder output from all 47 species
MA_10435309g0010 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.04 OrthoFinder output from all 47 species
MA_10435706g0010 TPS03, ATTPS03 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
MA_10435715g0010 TPS02 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
MA_7940170g0010 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.03 OrthoFinder output from all 47 species
Mp2g24630.1 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.02 OrthoFinder output from all 47 species
Mp2g24640.1 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
Mp6g05430.1 TPS04, TPS4, GES Bifunctional levopimaradiene synthase, chloroplastic... 0.03 OrthoFinder output from all 47 species
Msp_g33503 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14979 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29991 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29992 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33487 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35982 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37905 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38612 KS, KS1, ATKS1, ATKS, GA2 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38613 KS, KS1, ATKS1, ATKS, GA2 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06932 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05101 KS, KS1, ATKS1, ATKS, GA2 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19221 KS, KS1, ATKS1, ATKS, GA2 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19222 KS, KS1, ATKS1, ATKS, GA2 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25469 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g33861 No alias EC_5.5 intramolecular lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59339 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52511 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Smo403763 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo403764 KS, KS1, ATKS1, ATKS, GA2 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
Solyc08g005670.2.1 Solyc08g005670 Beta-phellandrene synthase... 0.05 OrthoFinder output from all 47 species
Solyc08g005677.1.1 KS, KS1, ATKS1,... mono-/sesquiterpene-/diterpene synthase. ent-kaurene synthase 0.06 OrthoFinder output from all 47 species
Solyc08g005710.3.1 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.06 OrthoFinder output from all 47 species
Spa_g49249 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g28857 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002123_P001 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.09 OrthoFinder output from all 47 species
Zm00001e004695_P001 KS, KS1, ATKS1,... ent-kaurene synthase 0.03 OrthoFinder output from all 47 species
Zm00001e017819_P001 KS, KS1, ATKS1,... ent-kaurene synthase 0.06 OrthoFinder output from all 47 species
Zm00001e040179_P001 KS, KS1, ATKS1,... ent-kaurene synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 260 467
No external refs found!