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  5. LOC_Os04g09680.1

LOC_Os04g09680.1 (ATOMT1, OMT1, LOC_Os04g09680)


Aliases : ATOMT1, OMT1, LOC_Os04g09680

Description : Probable inactive methyltransferase Os04g0175900 OS=Oryza sativa subsp. japonica (sp|q7xxd4|metl_orysj : 270.0) & Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 184.3)


Gene families : OG0000070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000070_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g09680.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272250 ATOMT1, OMT1,... Cell wall.lignin.monolignol synthesis.caffeic acid... 0.07 OrthoFinder output from all 47 species
AMTR_s00003p00247710 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.1... 0.05 OrthoFinder output from all 47 species
AMTR_s00003p00249110 ATOMT1, OMT1,... Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
AMTR_s00003p00249810 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
AMTR_s00003p00251480 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
AMTR_s00009p00239740 ATOMT1, OMT1,... Enzyme classification.EC_2 transferases.EC_2.1... 0.02 OrthoFinder output from all 47 species
AMTR_s02092p00000500 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.1... 0.05 OrthoFinder output from all 47 species
AMTR_s03062p00000070 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.1... 0.05 OrthoFinder output from all 47 species
AT1G21110 No alias O-methyltransferase family protein 0.03 OrthoFinder output from all 47 species
AT1G21120 No alias O-methyltransferase family protein 0.06 OrthoFinder output from all 47 species
AT1G21130 No alias O-methyltransferase family protein 0.04 OrthoFinder output from all 47 species
AT1G33030 No alias O-methyltransferase family protein 0.07 OrthoFinder output from all 47 species
AT1G62900 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 OrthoFinder output from all 47 species
AT1G63140 No alias O-methyltransferase family protein 0.04 OrthoFinder output from all 47 species
AT1G76790 No alias O-methyltransferase family protein 0.02 OrthoFinder output from all 47 species
AT5G54160 ATOMT1, OMT1 O-methyltransferase 1 0.03 OrthoFinder output from all 47 species
Adi_g043426 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aev_g35038 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aev_g40373 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ala_g27802 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ala_g28998 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ala_g30350 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ala_g34592 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Als_g15775 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Als_g49251 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Als_g59927 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aob_g32284 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aop_g31832 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Aop_g67670 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aop_g67872 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene09961.t1 ATOMT1, OMT1,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene10878.t1 Aspi01Gene10878 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene13658.t1 ATOMT1, OMT1,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene22482.t1 ATOMT1, OMT1,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene33341.t1 ATOMT1, OMT1,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene33683.t1 ATOMT1, OMT1,... EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene66646.t1 ATOMT1, OMT1,... EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Cba_g03777 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Cba_g37097 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ceric.1Z068200.1 ATOMT1, OMT1,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dac_g16023 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dac_g41684 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dcu_g45745 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Dde_g02093 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dde_g13134 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
GSVIVT01020734001 No alias Trans-resveratrol di-O-methyltransferase OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
GSVIVT01021134001 No alias Trans-resveratrol di-O-methyltransferase OS=Vitis vinifera 0.05 OrthoFinder output from all 47 species
GSVIVT01021135001 No alias Trans-resveratrol di-O-methyltransferase OS=Vitis vinifera 0.07 OrthoFinder output from all 47 species
GSVIVT01030545001 No alias Xanthohumol 4-O-methyltransferase OS=Humulus lupulus 0.03 OrthoFinder output from all 47 species
GSVIVT01038653001 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.04 OrthoFinder output from all 47 species
Gb_25896 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
Gb_33949 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.06 OrthoFinder output from all 47 species
Gb_33950 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
Gb_33953 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.05 OrthoFinder output from all 47 species
Gb_33954 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.02 OrthoFinder output from all 47 species
Gb_36959 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
Gb_38581 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.02 OrthoFinder output from all 47 species
Gb_40569 ATOMT1, OMT1 (R,S)-reticuline 7-O-methyltransferase OS=Papaver... 0.06 OrthoFinder output from all 47 species
LOC_Os04g01470.1 ATOMT1, OMT1,... Caffeate O-methyltransferase-like protein 2 OS=Oryza... 0.04 OrthoFinder output from all 47 species
LOC_Os04g09604.1 LOC_Os04g09604 Probable inactive methyltransferase Os04g0175900... 0.06 OrthoFinder output from all 47 species
LOC_Os08g35310.1 LOC_Os08g35310 Trans-resveratrol di-O-methyltransferase OS=Vitis... 0.04 OrthoFinder output from all 47 species
LOC_Os09g17560.1 LOC_Os09g17560 Acetylserotonin O-methyltransferase 1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os10g02880.1 LOC_Os10g02880 Acetylserotonin O-methyltransferase 2 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os12g09770.1 ATOMT1, OMT1,... 3-aminomethylindole N-methyltransferase OS=Hordeum... 0.04 OrthoFinder output from all 47 species
Len_g16258 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Len_g26546 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Len_g30905 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Len_g33494 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Len_g57667 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Lfl_g12150 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Lfl_g14927 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Lfl_g25026 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Lfl_g27610 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Lfl_g33099 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Lfl_g37918 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Lfl_g40509 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
MA_10375504g0010 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.02 OrthoFinder output from all 47 species
MA_10427825g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10431530g0010 No alias no description available(sp|i3plq7|somt3_papso : 92.8) &... 0.03 OrthoFinder output from all 47 species
MA_10432299g0010 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
MA_10436313g0010 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
MA_363801g0010 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
MA_428462g0010 No alias Caffeic acid 3-O-methyltransferase OS=Medicago sativa... 0.02 OrthoFinder output from all 47 species
MA_7793925g0010 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
Mp2g09790.1 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.02 OrthoFinder output from all 47 species
Mp2g19610.1 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.02 OrthoFinder output from all 47 species
Mp2g21090.1 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.04 OrthoFinder output from all 47 species
Mp4g03500.1 No alias (S)-scoulerine 9-O-methyltransferase OS=Coptis japonica... 0.02 OrthoFinder output from all 47 species
Mp4g03510.1 No alias (S)-scoulerine 9-O-methyltransferase OS=Coptis japonica... 0.03 OrthoFinder output from all 47 species
Msp_g21180 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Msp_g30504 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Msp_g34469 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Msp_g35745 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Nbi_g08225 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Nbi_g09824 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Nbi_g12465 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Nbi_g16960 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Nbi_g43533 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ore_g26095 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ore_g32236 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ore_g32237 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Pir_g05863 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Pir_g35322 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Pir_g49280 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Pir_g62044 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Pnu_g03449 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Pnu_g04468 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Pnu_g08774 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Pnu_g08910 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Pnu_g20058 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Pnu_g23848 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
Pnu_g24870 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ppi_g42632 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ppi_g43370 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Sam_g02461 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Sam_g11152 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Sam_g21927 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Sam_g41061 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Sam_g43909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo134942 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
Smo438615 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.02 OrthoFinder output from all 47 species
Solyc03g097700.3.1 Solyc03g097700 Trans-resveratrol di-O-methyltransferase OS=Vitis... 0.04 OrthoFinder output from all 47 species
Solyc06g060215.1.1 ATOMT1, OMT1,... Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from all 47 species
Solyc06g064500.3.1 ATOMT1, OMT1,... Trans-resveratrol di-O-methyltransferase OS=Vitis... 0.03 OrthoFinder output from all 47 species
Solyc10g085830.2.1 Solyc10g085830 nicotinate N-methyltransferase 0.06 OrthoFinder output from all 47 species
Solyc12g041940.1.1 Solyc12g041940 Trans-resveratrol di-O-methyltransferase OS=Vitis... 0.03 OrthoFinder output from all 47 species
Solyc12g041950.3.1 Solyc12g041950 Trans-resveratrol di-O-methyltransferase OS=Vitis... 0.04 OrthoFinder output from all 47 species
Spa_g11792 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Tin_g24665 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Tin_g31646 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Tin_g32201 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Tin_g40622 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Zm00001e001851_P001 Zm00001e001851 5-pentadecatrienyl resorcinol O-methyltransferase... 0.09 OrthoFinder output from all 47 species
Zm00001e009145_P001 Zm00001e009145 5-pentadecatrienyl resorcinol O-methyltransferase... 0.05 OrthoFinder output from all 47 species
Zm00001e020964_P001 Zm00001e020964 Probable O-methyltransferase 2 OS=Sorghum bicolor... 0.03 OrthoFinder output from all 47 species
Zm00001e021534_P002 Zm00001e021534 O-methyltransferase ZRP4 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Zm00001e021722_P001 ATOMT1, OMT1,... caffeic acid O-methyltransferase (COMT) 0.04 OrthoFinder output from all 47 species
Zm00001e033450_P001 Zm00001e033450 Acetylserotonin O-methyltransferase 1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e037965_P002 Zm00001e037965 5-pentadecatrienyl resorcinol O-methyltransferase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR012967 Plant_MeTrfase_dimerisation 25 71
IPR001077 O_MeTrfase_dom 129 231
No external refs found!