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  5. LOC_Os04g09540.1

LOC_Os04g09540.1 (LOC_Os04g09540)


Aliases : LOC_Os04g09540

Description : Probable carboxylesterase Os04g0669500 OS=Oryza sativa subsp. japonica (sp|q0j969|caeh1_orysj : 90.5)


Gene families : OG0001188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001188_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g09540.1
Cluster HCCA: Cluster_330

Target Alias Description ECC score Gene Family Method Actions
AT1G52460 No alias alpha/beta-Hydrolases superfamily protein 0.01 OrthoFinder output from all 47 species
AT1G52470 No alias alpha/beta-Hydrolases superfamily protein 0.01 OrthoFinder output from all 47 species
AT4G22305 No alias alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
Aop_g56627 No alias immunity suppressor (SOBER/TIPSY) of effector-triggered... 0.03 OrthoFinder output from all 47 species
GSVIVT01035817001 No alias Probable carboxylesterase Os04g0669500 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Solyc08g067160.3.1 Solyc08g067160 Probable carboxylesterase Os04g0669500 OS=Oryza sativa... 0.12 OrthoFinder output from all 47 species
Zm00001e026653_P001 Zm00001e026653 Probable carboxylesterase Os04g0669500 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR003140 PLipase/COase/thioEstase 23 245
No external refs found!