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  5. LOC_Os04g07110.1

LOC_Os04g07110.1 (LOC_Os04g07110)


Aliases : LOC_Os04g07110

Description : no hits & (original description: none)


Gene families : OG0012286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g07110.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g05700.1 LOC_Os04g05700 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g06300.1 LOC_Os04g06300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g06510.1 LOC_Os04g06510 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g06590.1 LOC_Os04g06590 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g08080.1 LOC_Os04g08080 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR025315 DUF4220 49 380
IPR007658 DUF594 649 694
No external refs found!