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  5. LOC_Os04g04640.1

LOC_Os04g04640.1 (emb1075, LOC_Os04g04640)


Aliases : emb1075, LOC_Os04g04640

Description : Serine decarboxylase 3 OS=Oryza sativa subsp. japonica (sp|q7x8d4|sdc3_orysj : 484.0)


Gene families : OG0002528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002528_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g04640.1

Target Alias Description ECC score Gene Family Method Actions
Als_g22218 emb1075 serine decarboxylase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03514 emb1075 serine decarboxylase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g15529 emb1075 serine decarboxylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_39829g0020 emb1075 Serine decarboxylase 1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Solyc08g006740.3.1 emb1075, Solyc08g006740 Histidine decarboxylase OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Solyc08g066220.4.1 emb1075, Solyc08g066220 Histidine decarboxylase OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species
Solyc08g068665.1.1 emb1075, Solyc08g068665 Histidine decarboxylase OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Solyc08g068680.4.1 emb1075, Solyc08g068680 Histidine decarboxylase OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA

No InterPro domains available for this sequence

No external refs found!