1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g02000.1

LOC_Os04g02000.1 (LOC_Os04g02000)


Aliases : LOC_Os04g02000

Description : no hits & (original description: none)


Gene families : OG0004940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004940_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g02000.1

Target Alias Description ECC score Gene Family Method Actions
AT2G17975 No alias zinc finger (Ran-binding) family protein 0.02 OrthoFinder output from all 47 species
Als_g03574 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G023500.1 Ceric.03G023500 not classified & original description: pacid=50571996... 0.03 OrthoFinder output from all 47 species
Dac_g13648 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g033560.3.1 Solyc03g033560 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g41537 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008798_P001 Zm00001e008798 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 20 47
IPR001876 Znf_RanBP2 63 91
IPR001876 Znf_RanBP2 307 335
IPR001876 Znf_RanBP2 178 205
No external refs found!