LOC_Os04g01960.1 (LOC_Os04g01960)


Aliases : LOC_Os04g01960

Description : no hits & (original description: none)


Gene families : OG0001007 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001007_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g01960.1

Target Alias Description ECC score Gene Family Method Actions
AT2G01580 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT3G07510 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
AT3G46890 No alias BEST Arabidopsis thaliana protein match is: maternal... 0.03 OrthoFinder output from all 47 species
Adi_g017033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61708.t1 Aspi01Gene61708 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61950.t1 Aspi01Gene61950 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10442 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029597001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_38166 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g48540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g53923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_97456g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g05026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g05901 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g43639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35621 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA

No InterPro domains available for this sequence

No external refs found!