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  5. LOC_Os03g63680.1

LOC_Os03g63680.1 (LOC_Os03g63680)


Aliases : LOC_Os03g63680

Description : no hits & (original description: none)


Gene families : OG0005809 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005809_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g63680.1

Target Alias Description ECC score Gene Family Method Actions
AT2G35790 No alias unknown protein; CONTAINS InterPro DOMAIN/s: Protein of... 0.03 OrthoFinder output from all 47 species
Adi_g019540 No alias assembly factor (TMEM70) in ATP synthase assembly &... 0.02 OrthoFinder output from all 47 species
Aop_g02422 No alias assembly factor (TMEM70) in ATP synthase assembly &... 0.04 OrthoFinder output from all 47 species
Mp1g16190.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Sam_g14094 No alias assembly factor (TMEM70) in ATP synthase assembly &... 0.02 OrthoFinder output from all 47 species
Solyc05g056090.3.1 Solyc05g056090 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g00641 No alias assembly factor (TMEM70) in ATP synthase assembly &... 0.04 OrthoFinder output from all 47 species
Zm00001e006400_P001 Zm00001e006400 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009724 TMEM70 122 247
No external refs found!