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  5. LOC_Os03g63300.1

LOC_Os03g63300.1 (SSP5, LOC_Os03g63300)


Aliases : SSP5, LOC_Os03g63300

Description : RNA polymerase-II phosphatase. subcluster B phosphatase


Gene families : OG0000687 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g63300.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00162p00080780 evm_27.TU.AmTr_v1... Protein modification.dephosphorylation.aspartate-based... 0.06 OrthoFinder output from all 47 species
AT5G45700 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.08 OrthoFinder output from all 47 species
Dac_g12695 SSP5 subcluster B phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
MA_20306g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_5808g0010 No alias Mitochondrial import inner membrane translocase subunit... 0.02 OrthoFinder output from all 47 species
Solyc02g071930.2.1 Solyc02g071930 subcluster D phosphatase 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR004274 FCP1_dom 261 421
No external refs found!