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  5. LOC_Os03g62850.1

LOC_Os03g62850.1 (AAE16, LOC_Os03g62850)


Aliases : AAE16, LOC_Os03g62850

Description : Probable acyl-activating enzyme 16, chloroplastic OS=Arabidopsis thaliana (sp|q9lk39|aae16_arath : 898.0)


Gene families : OG0003181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g62850.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Aop_g03228 AAE15 medium-chain acyl-ACP synthetase & original description: none 0.03 OrthoFinder output from all 47 species
Cre06.g299800 AAE15 Probable acyl-activating enzyme 16, chloroplastic... 0.02 OrthoFinder output from all 47 species
GSVIVT01022434001 AAE16 Probable acyl-activating enzyme 16, chloroplastic... 0.04 OrthoFinder output from all 47 species
Lfl_g18663 AAE15 medium-chain acyl-ACP synthetase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19872 AAE15 medium-chain acyl-ACP synthetase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017150 tRNA dihydrouridine synthase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0106413 dihydrouridine synthase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 116 624
No external refs found!