1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g61600.1

LOC_Os03g61600.1 (ATPURM, PUR5, LOC_Os03g61600)


Aliases : ATPURM, PUR5, LOC_Os03g61600

Description : aminoimidazole RN synthase


Gene families : OG0005193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005193_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g61600.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AT3G55010 ATPURM, PUR5 phosphoribosylformylglycinamidine cyclo-ligase,... 0.04 OrthoFinder output from all 47 species
Cre07.g318750 ATPURM, PUR5 Nucleotide metabolism.purines.ribonucleotide (RN)... 0.01 OrthoFinder output from all 47 species
Mp7g12650.1 ATPURM, PUR5 aminoimidazole RN synthase 0.02 OrthoFinder output from all 47 species
Nbi_g05778 ATPURM, PUR5 aminoimidazole RN synthetase *(PUR5) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g66662 ATPURM, PUR5 aminoimidazole RN synthetase *(PUR5) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18006 No alias aminoimidazole RN synthetase *(PUR5) & original description: none 0.02 OrthoFinder output from all 47 species
Smo117177 ATPURM, PUR5 Nucleotide metabolism.purines.ribonucleotide (RN)... 0.03 OrthoFinder output from all 47 species
Zm00001e031296_P001 ATPURM, PUR5,... aminoimidazole RN synthase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR016188 PurM-like_N 113 217
IPR010918 PurM-like_C_dom 230 394
No external refs found!