1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g61580.1

LOC_Os03g61580.1 (LOC_Os03g61580)


Aliases : LOC_Os03g61580

Description : no hits & (original description: none)


Gene families : OG0000464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000464_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g61580.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g013972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G069600.1 Ceric.15G069600 not classified & original description: pacid=50640535... 0.03 OrthoFinder output from all 47 species
Ehy_g03593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g065560.4.1 Solyc01g065560 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e006273_P001 Zm00001e006273 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR008507 DUF789 118 419
No external refs found!