1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g60430.2

LOC_Os03g60430.2 (AP2, FLO2, FL1, LOC_Os03g60430)


Aliases : AP2, FLO2, FL1, LOC_Os03g60430

Description : transcription factor (AP2)


Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g60430.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00035p00205430 AP2, FLO2, FL1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00065p00077750 DRG, CKC, CKC1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Cba_g29361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09110 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Dde_g19882 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01023697001 ADAP RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01025548001 RAP2.7, TOE1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
LOC_Os01g67410.1 PLT1, LOC_Os01g67410 transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
LOC_Os02g40070.1 PLT2, LOC_Os02g40070 transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
LOC_Os03g07940.1 LOC_Os03g07940 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
LOC_Os06g44750.1 AIL5, EMK, CHO1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
LOC_Os11g19060.1 BBM, LOC_Os11g19060 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Len_g46832 ADAP AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Pir_g37090 ADAP RAM1-dependent transcription factor *(WRI5) & original... 0.06 OrthoFinder output from all 47 species
Pnu_g23616 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e032754_P003 DRG, CKC, CKC1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 209 259
IPR001471 AP2/ERF_dom 117 166
No external refs found!