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  5. LOC_Os03g59720.1

LOC_Os03g59720.1 (LOC_Os03g59720)


Aliases : LOC_Os03g59720

Description : component mtRPL36 of large ribosomal subunit proteome


Gene families : OG0004378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004378_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g59720.1

Target Alias Description ECC score Gene Family Method Actions
AT5G20180 No alias Ribosomal protein L36 0.06 OrthoFinder output from all 47 species
Aev_g35798 No alias component *(bL36m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
MA_10426254g0010 No alias component mtRPL36 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Mp8g11400.1 No alias component mtRPL36 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Pp3c15_5230V3.1 Pp3c15_5230 Ribosomal protein L36 0.04 OrthoFinder output from all 47 species
Solyc07g008270.3.1 Solyc07g008270 component mtRPL36 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000473 Ribosomal_L36 1 38
No external refs found!