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  5. LOC_Os03g59620.1

LOC_Os03g59620.1 (SDP1, LOC_Os03g59620)


Aliases : SDP1, LOC_Os03g59620

Description : Patatin-type lipase


Gene families : OG0002622 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002622_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g59620.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Adi_g020550 SDP1 Patatin-type lipase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g02560 SDP1 Patatin-type lipase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g45714 SDP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0352.g066625 SDP1 Patatin-type lipase & original description: CDS=429-2705 0.04 OrthoFinder output from all 47 species
Cre17.g699100 SDP1 Lipid metabolism.lipid degradation.triacylglycerol... 0.05 OrthoFinder output from all 47 species
GSVIVT01033566001 SDP1 Lipid metabolism.lipid degradation.triacylglycerol... 0.06 OrthoFinder output from all 47 species
Gb_06461 SDP1 Triacylglycerol lipase SDP1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc10g079770.3.1 SDP1, Solyc10g079770 Patatin-type lipase 0.03 OrthoFinder output from all 47 species
Spa_g06229 SDP1 Patatin-type lipase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006127_P001 SDP1, Zm00001e006127 Patatin-type lipase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004806 triglyceride lipase activity IEA Interproscan
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002641 PNPLA_dom 229 428
IPR021771 Triacylglycerol_lipase_N 93 222
No external refs found!