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  5. LOC_Os03g59470.1

LOC_Os03g59470.1 (LOC_Os03g59470)


Aliases : LOC_Os03g59470

Description : Probable protein phosphatase 2C 55 OS=Arabidopsis thaliana (sp|q9suk9|p2c55_arath : 385.0)


Gene families : OG0000571 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g59470.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00203750 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C BIPP2C1 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Adi_g041196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59328.t1 Aspi01Gene59328 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g00510.1 No alias Probable protein phosphatase 2C 55 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g04957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02235 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020787 No alias not classified & original description: CDS=1-1557 0.02 OrthoFinder output from all 47 species
Sam_g07867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 261 473
No external refs found!