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Aliases : LOC_Os03g58740
Description : no hits & (original description: none)
Gene families : OG0003300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003300_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os03g58740.1 | |
| Cluster | HCCA: Cluster_106 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00133p00038030 | evm_27.TU.AmTr_v1... | No description available | 0.05 | OrthoFinder output from all 47 species | |
| AT1G27100 | No alias | Actin cross-linking protein | 0.11 | OrthoFinder output from all 47 species | |
| AT1G69890 | No alias | Protein of unknown function (DUF569) | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g117749 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g25722 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g15276 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020093001 | No alias | No description available | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01032593001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Gb_16512 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g09384.1 | LOC_Os07g09384 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Mp8g10120.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03785 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g08698 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g08702 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo172683 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g010430.4.1 | Solyc01g010430 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g087580.3.1 | Solyc02g087580 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Solyc05g006780.3.1 | Solyc05g006780 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc11g045360.1.1 | Solyc11g045360 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e006033_P002 | Zm00001e006033 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e011845_P001 | Zm00001e011845 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e033034_P001 | Zm00001e033034 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
| BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007679 | DUF569 | 1 | 145 |
| No external refs found! |