Aliases : PRA1.E, LOC_Os03g58410
Description : B-G-class Rab-GDF protein
Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G07110 | PRA1.B6 | prenylated RAB acceptor 1.B6 | 0.02 | OrthoFinder output from all 47 species | |
Als_g13344 | PRA1.B2 | B-G-class Rab-GDF protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g52368 | PRA1.B5 | B-G-class Rab-GDF protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene28428.t1 | PRA1.B2, Aspi01Gene28428 | B-G-class Rab-GDF protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene70815.t1 | PRA7, PRA1.F2,... | B-G-class Rab-GDF protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g45879 | PRA1.B5 | B-G-class Rab-GDF protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g06416 | PRA1.B1 | B-G-class Rab-GDF protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Gb_00593 | No alias | B-G-class Rab-GDF protein | 0.03 | OrthoFinder output from all 47 species | |
Gb_20840 | PRA1.B2 | B-G-class Rab-GDF protein | 0.02 | OrthoFinder output from all 47 species | |
MA_10432636g0020 | PRA1.B4 | B-G-class Rab-GDF protein | 0.02 | OrthoFinder output from all 47 species | |
Msp_g05135 | PRA1.B5 | B-G-class Rab-GDF protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0186.g025049 | PRA1.B3 | B-G-class Rab-GDF protein & original description: CDS=1-630 | 0.04 | OrthoFinder output from all 47 species | |
Spa_g09655 | PRA1.B5 | B-G-class Rab-GDF protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g39132 | PRA1.B5 | B-G-class Rab-GDF protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e023951_P001 | PRA1.B2, Zm00001e023951 | B-G-class Rab-GDF protein | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e031897_P001 | PRA1.B2, Zm00001e031897 | B-G-class Rab-GDF protein | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | HCCA |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
CC | GO:0005787 | signal peptidase complex | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006465 | signal peptide processing | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0016160 | amylase activity | IEP | HCCA |
MF | GO:0016161 | beta-amylase activity | IEP | HCCA |
BP | GO:0016485 | protein processing | IEP | HCCA |
BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0051604 | protein maturation | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
CC | GO:1905368 | peptidase complex | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004895 | Prenylated_rab_accept_PRA1 | 71 | 204 |
No external refs found! |