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  5. LOC_Os03g54980.1

LOC_Os03g54980.1 (LOC_Os03g54980)


Aliases : LOC_Os03g54980

Description : Protein Asterix OS=Arabidopsis thaliana (sp|q9sd88|aster_arath : 131.0)


Gene families : OG0008070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g54980.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00120120 evm_27.TU.AmTr_v1... Protein Asterix OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre12.g501800 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_35056 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g13000.1 No alias Protein Asterix OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc06g069520.3.1 Solyc06g069520 Protein Asterix OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e005722_P001 Zm00001e005722 Protein Asterix OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0008535 respiratory chain complex IV assembly IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR005351 ASTER 18 110
No external refs found!