Aliases : LOC_Os03g53760
Description : DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana (sp|f4hyj7|dexh3_arath : 1304.0)
Gene families : OG0000629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000629_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00004p00115360 | evm_27.TU.AmTr_v1... | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00028p00237040 | evm_27.TU.AmTr_v1... | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AT1G58060 | No alias | RNA helicase family protein | 0.07 | OrthoFinder output from all 47 species | |
AT2G01130 | No alias | DEA(D/H)-box RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g021909 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g01587 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g12900 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0449.g070725 | No alias | not classified & original description: CDS=208-3285 | 0.03 | OrthoFinder output from all 47 species | |
Ceric.20G077000.1 | Ceric.20G077000 | not classified & original description: pacid=50565979... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.23G070100.1 | Ceric.23G070100 | not classified & original description: pacid=50609964... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000786.1 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021094.26 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Cre03.g171650 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Cre06.g266416 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.01 | OrthoFinder output from all 47 species | |
Cre12.g492450 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Dac_g10585 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01022608001 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01023271001 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
MA_10429367g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
MA_177779g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Mp5g09990.1 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.06 | OrthoFinder output from all 47 species | |
Pir_g18315 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g09359 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g14536 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g15305 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g14582 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g34443 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Smo177444 | No alias | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g006710.4.1 | Solyc01g006710 | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g006970.4.1 | Solyc01g006970 | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
Solyc01g103690.4.1 | Solyc01g103690 | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... | 0.08 | OrthoFinder output from all 47 species | |
Spa_g47720 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g02164 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e004608_P001 | Zm00001e004608 | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0004386 | helicase activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0004649 | poly(ADP-ribose) glycohydrolase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
MF | GO:0010181 | FMN binding | IEP | HCCA |
BP | GO:0010921 | regulation of phosphatase activity | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
BP | GO:0019220 | regulation of phosphate metabolic process | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
MF | GO:0019902 | phosphatase binding | IEP | HCCA |
MF | GO:0019903 | protein phosphatase binding | IEP | HCCA |
BP | GO:0031399 | regulation of protein modification process | IEP | HCCA |
BP | GO:0035303 | regulation of dephosphorylation | IEP | HCCA |
BP | GO:0035304 | regulation of protein dephosphorylation | IEP | HCCA |
MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | HCCA |
BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | HCCA |
BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
BP | GO:0051336 | regulation of hydrolase activity | IEP | HCCA |
BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
No external refs found! |