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  5. LOC_Os03g53400.1

LOC_Os03g53400.1 (LOC_Os03g53400)


Aliases : LOC_Os03g53400

Description : Protein LIFEGUARD 4 OS=Arabidopsis thaliana (sp|q9sa63|lfg4_arath : 288.0)


Gene families : OG0000981 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000981_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g53400.1

Target Alias Description ECC score Gene Family Method Actions
AT4G02690 No alias Bax inhibitor-1 family protein 0.05 OrthoFinder output from all 47 species
Aev_g44567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009098 No alias not classified & original description: CDS=47-877 0.03 OrthoFinder output from all 47 species
Azfi_s3807.g117011 No alias not classified & original description: CDS=47-877 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000881.4 No alias Protein LIFEGUARD 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.116 No alias Protein LIFEGUARD 4 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre01.g035450 No alias Protein LIFEGUARD 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ehy_g04366 BIL4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01001203001 No alias Protein LIFEGUARD 4 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Ore_g08225 BIL4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c9_13460V3.1 BIL4, Pp3c9_13460 Bax inhibitor-1 family protein 0.01 OrthoFinder output from all 47 species
Solyc06g084130.3.1 Solyc06g084130 Protein LIFEGUARD 4 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Solyc09g065610.2.1 Solyc09g065610 Protein LIFEGUARD 4 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e005653_P001 Zm00001e005653 Protein LIFEGUARD 4 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Zm00001e012052_P001 Zm00001e012052 Protein LIFEGUARD 4 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006214 Bax_inhibitor_1-related 38 244
No external refs found!