1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g53100.1

LOC_Os03g53100.1 (RR22, ARR22, LOC_Os03g53100)


Aliases : RR22, ARR22, LOC_Os03g53100

Description : Two-component response regulator ORR41 OS=Oryza sativa subsp. japonica (sp|q75kw7|orr41_orysj : 211.0)


Gene families : OG0001831 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001831_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g53100.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00205980 ARR24, RR24,... Two-component response regulator ORR41 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
AT3G04280 RR22, ARR22 response regulator 22 0.05 OrthoFinder output from all 47 species
Aev_g09827 ETR, ETR1, EIN1, AtETR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23671 ARR24, RR24 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20237.t1 HK5, AHK5, CKI2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020904.27 AHK2, HK2 No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01014514001 ARR24, RR24 No description available 0.03 OrthoFinder output from all 47 species
Gb_27280 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g03043 ARR24, RR24 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g05497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005629_P001 ARR24, RR24,... Two-component response regulator ORR41 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 8 117
No external refs found!