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  5. LOC_Os03g52160.1

LOC_Os03g52160.1 (LOC_Os03g52160)


Aliases : LOC_Os03g52160

Description : Uncharacterized protein At1g28695 OS=Arabidopsis thaliana (sp|q3e6y3|y1869_arath : 225.0)


Gene families : OG0000471 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000471_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g52160.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT1G28695 No alias Nucleotide-diphospho-sugar transferase family protein 0.09 OrthoFinder output from all 47 species
AT1G28710 No alias Nucleotide-diphospho-sugar transferase family protein 0.04 OrthoFinder output from all 47 species
Adi_g098235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07144 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03648.t1 Aspi01Gene03648 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32747.t1 Aspi01Gene32747 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0060.g034842 No alias not classified & original description: CDS=159-1787 0.02 OrthoFinder output from all 47 species
Dac_g08536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018316001 No alias Uncharacterized protein At1g28695 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01018317001 No alias Uncharacterized protein At1g28695 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01024334001 No alias Uncharacterized protein At1g28695 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_31868 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g03730.1 LOC_Os03g03730 Uncharacterized protein At4g15970 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_501889g0010 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_8547205g0010 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_955315g0010 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g10076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34116 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g088790.2.1 Solyc01g088790 Uncharacterized protein At1g28695 OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species
Solyc03g094110.4.1 Solyc03g094110 Uncharacterized protein At1g28695 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g27436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003660_P001 Zm00001e003660 Uncharacterized protein At4g15970 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e012100_P001 Zm00001e012100 Uncharacterized protein At1g28695 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Zm00001e018828_P004 Zm00001e018828 Uncharacterized protein At4g15970 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e021491_P002 Zm00001e021491 Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e028448_P001 Zm00001e028448 Uncharacterized protein At4g15970 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e028449_P001 Zm00001e028449 Uncharacterized protein At4g15970 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e033311_P001 Zm00001e033311 Uncharacterized protein At4g15970 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005069 Nucl-diP-sugar_transferase 112 318
No external refs found!