LOC_Os03g51600.1 (TOR2, TUA4, LOC_Os03g51600)


Aliases : TOR2, TUA4, LOC_Os03g51600

Description : component alpha-Tubulin of alpha-beta-Tubulin heterodimer


Gene families : OG0000233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g51600.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00112490 TOR2, TUA4,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
AT1G04820 TOR2, TUA4 tubulin alpha-4 chain 0.03 OrthoFinder output from all 47 species
AT1G50010 TUA2 tubulin alpha-2 chain 0.04 OrthoFinder output from all 47 species
AT1G64740 TUA1 alpha-1 tubulin 0.02 OrthoFinder output from all 47 species
AT4G14960 TUA6 Tubulin/FtsZ family protein 0.03 OrthoFinder output from all 47 species
AT5G19770 TUA3 tubulin alpha-3 0.05 OrthoFinder output from all 47 species
AT5G19780 TUA5 tubulin alpha-5 0.04 OrthoFinder output from all 47 species
Adi_g102765 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ala_g23348 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Als_g08220 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Als_g10639 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Als_g47452 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Als_g57469 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Als_g57470 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aop_g04158 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aop_g60213 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Aspi01Gene19402.t1 TOR2, TUA4,... alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.06G074000.1 TUA6, Ceric.06G074000 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Ceric.12G037900.1 TUA3, Ceric.12G037900 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.21G070800.1 TOR2, TUA4,... alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.24G052000.1 TOR2, TUA4,... alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000237.34 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000404.34 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 OrthoFinder output from all 47 species
Cre03.g190950 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Cre04.g216850 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Dac_g09352 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dac_g10504 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dac_g12327 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dac_g22398 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Dac_g22562 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Dcu_g17258 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Dde_g24024 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Dde_g26003 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Dde_g29806 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Dde_g35419 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ehy_g16456 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
GSVIVT01009258001 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
GSVIVT01025462001 TUA3 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.1 OrthoFinder output from all 47 species
GSVIVT01037046001 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Gb_00907 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 47 species
Len_g12228 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Len_g26529 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Lfl_g23976 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
MA_184192g0010 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.07 OrthoFinder output from all 47 species
MA_273360g0010 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
Mp1g24530.1 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Mp2g23500.1 TOR2, TUA4 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Mp4g00550.1 TUA3 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
Mp8g12620.1 TUA6 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Msp_g17277 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Nbi_g06691 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Nbi_g10101 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Ore_g03977 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ore_g28972 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Pir_g03063 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Pir_g14199 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Pp3c25_1010V3.1 TUA3, Pp3c25_1010 tubulin alpha-5 0.02 OrthoFinder output from all 47 species
Ppi_g13625 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Ppi_g24737 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ppi_g28726 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Sam_g09229 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Sam_g09230 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Sam_g16657 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Sam_g16658 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Smo100162 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Smo178975 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Smo227365 TOR2, TUA4 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Solyc04g077020.3.1 TUA6, Solyc04g077020 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Solyc08g006890.3.1 TUA6, Solyc08g006890 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
Spa_g04259 TOR2, TUA4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04277 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g05097 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Spa_g05098 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Spa_g07521 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g17285 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g26077 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g26675 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g47009 TUA6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05549 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Tin_g05948 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Tin_g09529 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Zm00001e005536_P001 TUA6, Zm00001e005536 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 47 species
Zm00001e010608_P001 TUA3, Zm00001e010608 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
Zm00001e011939_P002 TUA6, Zm00001e011939 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.06 OrthoFinder output from all 47 species
Zm00001e012118_P001 TUA6, Zm00001e012118 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
Zm00001e035332_P001 TUA3, Zm00001e035332 component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 213
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 392
No external refs found!