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  5. LOC_Os03g50960.1

LOC_Os03g50960.1 (LOC_Os03g50960)


Aliases : LOC_Os03g50960

Description : no hits & (original description: none)


Gene families : OG0000520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g50960.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00233360 evm_27.TU.AmTr_v1... 36.4 kDa proline-rich protein OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
AT1G12100 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT2G10940 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT4G12530 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
Aspi01Gene18968.t1 Aspi01Gene18968 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18969.t1 Aspi01Gene18969 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18981.t1 Aspi01Gene18981 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18983.t1 Aspi01Gene18983 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18989.t1 Aspi01Gene18989 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.26G041500.1 AIR1, Ceric.26G041500 not classified & original description: pacid=50599792... 0.03 OrthoFinder output from all 47 species
Gb_33166 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g12357 AZI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63004 AIR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g083996.1.1 Solyc03g083996 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.04 OrthoFinder output from all 47 species
Solyc08g074480.1.1 Solyc08g074480 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g51578 AIR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000044_P001 Zm00001e000044 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR027923 Hydrophob_seed_dom 39 122
No external refs found!