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  5. LOC_Os03g49720.1

LOC_Os03g49720.1 (LOC_Os03g49720)


Aliases : LOC_Os03g49720

Description : Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana (sp|q9lu85|pap4_arath : 211.0)


Gene families : OG0005834 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005834_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g49720.1
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT3G26070 No alias Plastid-lipid associated protein PAP / fibrillin family protein 0.02 OrthoFinder output from all 47 species
Ala_g15037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04164 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g00944 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g22462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.28G040000.1 Ceric.28G040000 not classified & original description: pacid=50570971... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020603.30 No alias Probable plastid-lipid-associated protein 4,... 0.04 OrthoFinder output from all 47 species
Dcu_g42345 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01022998001 No alias Probable plastid-lipid-associated protein 4,... 0.03 OrthoFinder output from all 47 species
Len_g48766 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_10435383g0010 No alias Probable plastid-lipid-associated protein 4,... 0.03 OrthoFinder output from all 47 species
Mp1g00160.1 No alias Probable plastid-lipid-associated protein 4,... 0.04 OrthoFinder output from all 47 species
Nbi_g02685 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01288 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g35789 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g52172 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g06190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo85410 No alias Probable plastid-lipid-associated protein 4,... 0.02 OrthoFinder output from all 47 species
Spa_g50814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005397_P001 Zm00001e005397 Probable plastid-lipid-associated protein 4,... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 92 252
No external refs found!