1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g48490.1

LOC_Os03g48490.1 (LOC_Os03g48490)


Aliases : LOC_Os03g48490

Description : Uncharacterized protein At4g38062 OS=Arabidopsis thaliana (sp|p0cb23|y4862_arath : 226.0)


Gene families : OG0013902 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013902_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g48490.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT4G38062 No alias No description available 0.14 OrthoFinder output from all 47 species
Gb_15766 No alias Uncharacterized protein At4g38062 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10436396g0030 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc10g047540.3.1 Solyc10g047540 Uncharacterized protein At4g38062 OS=Arabidopsis... 0.14 OrthoFinder output from all 47 species
Solyc11g010620.3.1 Solyc11g010620 Uncharacterized protein At4g38062 OS=Arabidopsis... 0.16 OrthoFinder output from all 47 species
Zm00001e005311_P001 Zm00001e005311 Uncharacterized protein At4g38062 OS=Arabidopsis... 0.18 OrthoFinder output from all 47 species
Zm00001e012260_P001 Zm00001e012260 Uncharacterized protein At4g38062 OS=Arabidopsis... 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA

No InterPro domains available for this sequence

No external refs found!