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Aliases : LOC_Os03g47930
Description : regulatory protein (PATROL1) of CSC trafficking
Gene families : OG0000883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000883_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os03g47930.1 | |
| Cluster | HCCA: Cluster_170 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00067p00188350 | evm_27.TU.AmTr_v1... | Protein unc-13 homolog OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT1G04470 | No alias | Protein of unknown function (DUF810) | 0.03 | OrthoFinder output from all 47 species | |
| AT2G33420 | No alias | Protein of unknown function (DUF810) | 0.02 | OrthoFinder output from all 47 species | |
| AT5G06970 | No alias | Protein of unknown function (DUF810) | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g009548 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g02574 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g02581 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g02603 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g05748 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g12632 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04476 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0099.g044165 | No alias | not classified & original description: CDS=394-3840 | 0.08 | OrthoFinder output from all 47 species | |
| Cba_g07761 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G084700.1 | Ceric.13G084700 | regulatory protein *(PATROL1) involved in cellulose... | 0.12 | OrthoFinder output from all 47 species | |
| Dac_g03416 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g03167 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g04106 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g39400 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g01671 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01019827001 | No alias | Protein unc-13 homolog OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01035623001 | No alias | Protein unc-13 homolog OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036645001 | No alias | Protein unc-13 homolog OS=Arabidopsis thaliana | 0.1 | OrthoFinder output from all 47 species | |
| Gb_20494 | No alias | Protein unc-13 homolog OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_29552 | No alias | regulatory protein (PATROL1) of CSC trafficking | 0.04 | OrthoFinder output from all 47 species | |
| Len_g16187 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g05725 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g12141 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10425785g0010 | No alias | Protein unc-13 homolog OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| MA_10431429g0010 | No alias | Protein unc-13 homolog OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10436391g0010 | No alias | Protein unc-13 homolog OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| MA_12587g0010 | No alias | Protein unc-13 homolog OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| MA_165845g0010 | No alias | Protein unc-13 homolog OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| MA_715866g0010 | No alias | Protein unc-13 homolog OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| MA_9285214g0010 | No alias | Protein unc-13 homolog OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g07000.1 | No alias | regulatory protein (PATROL1) of CSC trafficking | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g45403 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g03194 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g18251 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01379 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35190 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo92955 | No alias | Protein unc-13 homolog OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g096540.4.1 | Solyc01g096540 | regulatory protein (PATROL1) of CSC trafficking | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g005630.3.1 | Solyc03g005630 | Protein unc-13 homolog OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g066600.4.1 | Solyc08g066600 | Protein unc-13 homolog OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc08g080520.4.1 | Solyc08g080520 | Protein unc-13 homolog OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g090480.2.1 | Solyc09g090480 | Protein unc-13 homolog OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g06397 | No alias | regulatory protein *(PATROL1) involved in cellulose... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e000320_P001 | Zm00001e000320 | Protein unc-13 homolog OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004610_P001 | Zm00001e004610 | Protein unc-13 homolog OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027555_P001 | Zm00001e027555 | Protein unc-13 homolog OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031380_P001 | Zm00001e031380 | regulatory protein (PATROL1) of CSC trafficking | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005875 | microtubule associated complex | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| BP | GO:0007051 | spindle organization | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0015098 | molybdate ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0015689 | molybdate ion transport | IEP | HCCA |
| BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0022402 | cell cycle process | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
| BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051225 | spindle assembly | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| CC | GO:0070652 | HAUS complex | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0070925 | organelle assembly | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| BP | GO:0140694 | non-membrane-bounded organelle assembly | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |