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  5. LOC_Os03g42750.1

LOC_Os03g42750.1 (SEC3A, LOC_Os03g42750)


Aliases : SEC3A, LOC_Os03g42750

Description : component SEC3 of Exocyst complex


Gene families : OG0003449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g42750.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00178020 SEC3A,... Vesicle trafficking.target membrane tethering.Exocyst... 0.04 OrthoFinder output from all 47 species
AT1G47550 SEC3A exocyst complex component sec3A 0.07 OrthoFinder output from all 47 species
Aev_g07970 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09800 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g09078 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g09462 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25788.t1 SEC3B, Aspi01Gene25788 component *(SEC3) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25789.t1 SEC3A, Aspi01Gene25789 component *(SEC3) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14077 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.1Z003000.1 SEC3A, Ceric.1Z003000 component *(SEC3) of Exocyst complex & original... 0.09 OrthoFinder output from all 47 species
Ceric.31G058500.1 SEC3A, Ceric.31G058500 component *(SEC3) of Exocyst complex & original... 0.1 OrthoFinder output from all 47 species
Cre09.g392000 No alias Vesicle trafficking.target membrane tethering.Exocyst... 0.02 OrthoFinder output from all 47 species
Dcu_g07726 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g03957 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009623001 SEC3A Vesicle trafficking.target membrane tethering.Exocyst... 0.12 OrthoFinder output from all 47 species
Gb_27212 SEC3A component SEC3 of Exocyst complex 0.04 OrthoFinder output from all 47 species
Len_g16136 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03342 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.11 OrthoFinder output from all 47 species
Mp8g07200.1 SEC3A component SEC3 of Exocyst complex 0.1 OrthoFinder output from all 47 species
Ore_g06314 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56466 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01338 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004224 SEC3A component *(SEC3) of Exocyst complex & original... 0.02 OrthoFinder output from all 47 species
Smo440749 SEC3A Vesicle trafficking.target membrane tethering.Exocyst... 0.11 OrthoFinder output from all 47 species
Solyc12g088990.2.1 SEC3A, Solyc12g088990 component SEC3 of Exocyst complex 0.21 OrthoFinder output from all 47 species
Spa_g55671 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05219 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005089_P001 SEC3A, Zm00001e005089 component SEC3 of Exocyst complex 0.19 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEA Interproscan
BP GO:0006887 exocytosis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR028258 Sec3-PIP2_bind 50 145
IPR019160 Sec3_C 227 497
IPR019160 Sec3_C 583 872
No external refs found!