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Aliases : RGP2, ATRGP2, LOC_Os03g40270
Description : UDP-L-arabinose mutase
Gene families : OG0001238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001238_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00047p00209120 | ATRGP1, RGP1,... | Carbohydrate metabolism.nucleotide sugar... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G02230 | ATRGP1, RGP1 | reversibly glycosylated polypeptide 1 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G15650 | RGP2, ATRGP2 | reversibly glycosylated polypeptide 2 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g016169 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g082268 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g40610 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g06621 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g12669 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12775 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g31603 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g05517 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g38503 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g58989 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04276 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g22243 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0048.g030465 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: CDS=163-1227 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0110.g045465 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: CDS=87-1109 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g01842 | RGP3, RGP | UDP-L-arabinose mutase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g01869 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G101600.1 | ATRGP1, RGP1,... | UDP-L-arabinose mutase & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.33G002800.1 | ATRGP1, RGP1,... | UDP-L-arabinose mutase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cre13.g565800 | ATRGP1, RGP1 | Carbohydrate metabolism.nucleotide sugar... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g04103 | RGP3, RGP | UDP-L-arabinose mutase & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g07439 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g07553 | RGP3, RGP | UDP-L-arabinose mutase & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01008133001 | RGP3, RGP | Carbohydrate metabolism.nucleotide sugar... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05869 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g34861 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Mp2g10790.1 | RGP3, RGP | UDP-L-arabinose mutase | 0.05 | OrthoFinder output from all 47 species | |
| Mp2g10800.1 | ATRGP1, RGP1 | UDP-L-arabinose mutase | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g02764 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g09927 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g18828 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g01554 | RGP3, RGP | UDP-L-arabinose mutase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g09389 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g05889 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g15549 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0045.g013218 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: CDS=186-1241 | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g16092 | No alias | UDP-L-arabinose mutase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g18498 | No alias | UDP-L-arabinose mutase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo140071 | ATRGP1, RGP1 | Carbohydrate metabolism.nucleotide sugar... | 0.07 | OrthoFinder output from all 47 species | |
| Smo76446 | RGP2, ATRGP2 | Carbohydrate metabolism.nucleotide sugar... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g065740.3.1 | ATRGP1, RGP1,... | UDP-L-arabinose mutase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g089170.4.1 | ATRGP1, RGP1,... | UDP-L-arabinose mutase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g070390.3.1 | ATRGP1, RGP1,... | UDP-L-arabinose mutase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g005340.2.1 | ATRGP1, RGP1,... | UDP-L-arabinose mutase | 0.1 | OrthoFinder output from all 47 species | |
| Solyc04g051200.2.1 | Solyc04g051200 | UDP-L-arabinose mutase | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g012070.3.1 | ATRGP1, RGP1,... | UDP-L-arabinose mutase | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g24163 | ATRGP1, RGP1 | UDP-L-arabinose mutase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g40978 | RGP3, RGP | UDP-L-arabinose mutase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e006668_P001 | Zm00001e006668 | UDP-L-arabinose mutase | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e012459_P003 | RGP2, ATRGP2,... | UDP-L-arabinose mutase | 0.17 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004427 | inorganic diphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| CC | GO:0019867 | outer membrane | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030118 | clathrin coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030125 | clathrin vesicle coat | IEP | HCCA |
| CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | HCCA |
| CC | GO:0030132 | clathrin coat of coated pit | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
| CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR037595 | RGP_fam | 18 | 352 |
| No external refs found! |