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  5. LOC_Os03g29760.2

LOC_Os03g29760.2 (NF-YA6, LOC_Os03g29760)


Aliases : NF-YA6, LOC_Os03g29760

Description : component NF-YA of NF-Y transcription factor complex


Gene families : OG0000451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000451_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g29760.2

Target Alias Description ECC score Gene Family Method Actions
AT1G72830 HAP2C, NF-YA3, ATHAP2C nuclear factor Y, subunit A3 0.05 OrthoFinder output from all 47 species
AT3G05690 ATHAP2B, NF-YA2,... nuclear factor Y, subunit A2 0.04 OrthoFinder output from all 47 species
AT3G14020 NF-YA6 nuclear factor Y, subunit A6 0.04 OrthoFinder output from all 47 species
AT3G20910 NF-YA9 nuclear factor Y, subunit A9 0.04 OrthoFinder output from all 47 species
Als_g12310 HAP2A, ATHAP2A,... component *(NF-YA) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species
Aop_g03133 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Cba_g11720 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01015120001 HAP2C, NF-YA3, ATHAP2C RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
GSVIVT01022601001 NF-YA10 RNA biosynthesis.transcriptional activation.NF-Y... 0.02 OrthoFinder output from all 47 species
Gb_23157 NF-YA7 component NF-YA of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Gb_32704 NF-YA7 component NF-YA of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
LOC_Os07g41720.1 NF-YA8, LOC_Os07g41720 component NF-YA of NF-Y transcription factor complex 0.08 OrthoFinder output from all 47 species
Nbi_g07832 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Sam_g35457 No alias component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Zm00001e003228_P001 NF-YA7, Zm00001e003228 component NF-YA of NF-Y transcription factor complex 0.05 OrthoFinder output from all 47 species
Zm00001e005342_P003 NF-YA7, Zm00001e005342 component NF-YA of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001289 NFYA 164 219
No external refs found!