Aliases : NRPC2, LOC_Os03g28960
Description : DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis thaliana (sp|f4kd38|nrpc2_arath : 665.0)
Gene families : OG0000511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000511_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00010p00249150 | DRD2, NRPE2,... | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00020p00246930 | NRPC2,... | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g17610 | EMB1989, RPB2, NRPB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.05G021300.1 | EMB1989, RPB2,... | component *(NRPB2) of RNA polymerase II complex &... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g02906 | DRD2, NRPE2,... | component *(NRPE2) of RNA polymerase V complex &... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g32270 | NRPC2 | component *(NRPC2) of RNA polymerase III complex &... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g01687 | EMB1989, RPB2, NRPB2 | component *(NRPB2) of RNA polymerase II complex &... | 0.03 | OrthoFinder output from all 47 species | |
Gb_05262 | NRPC2 | subunit 2 of Pol III RNA polymerase | 0.02 | OrthoFinder output from all 47 species | |
MA_342841g0010 | NRPC2 | DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Mp4g21160.1 | EMB1989, RPB2, NRPB2 | subunit 2 of Pol II RNA polymerase | 0.02 | OrthoFinder output from all 47 species | |
Ore_g18280 | NRPC2 | component *(NRPC2) of RNA polymerase III complex &... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g110880.4.1 | DRD2, NRPE2,... | subunit 2 of Pol IV RNA polymerase. subunit 2 of Pol V... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g04426 | NRPC2 | component *(NRPC2) of RNA polymerase III complex &... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g20348 | EMB1989, RPB2, NRPB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e005007_P001 | EMB1989, RPB2,... | subunit 2 of Pol II RNA polymerase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e006792_P001 | DRD2, NRPE2,... | subunit 2 of Pol IV RNA polymerase. subunit 2 of Pol V... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
BP | GO:0006351 | DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004527 | exonuclease activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006302 | double-strand break repair | IEP | HCCA |
BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
CC | GO:0030014 | CCR4-NOT complex | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
No external refs found! |