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  5. LOC_Os03g27110.1

LOC_Os03g27110.1 (LOC_Os03g27110)


Aliases : LOC_Os03g27110

Description : no hits & (original description: none)


Gene families : OG0000572 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000572_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g27110.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT5G09430 No alias alpha/beta-Hydrolases superfamily protein 0.14 OrthoFinder output from all 47 species
Dcu_g40594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01038796001 No alias No description available 0.13 OrthoFinder output from all 47 species
LOC_Os07g42994.1 LOC_Os07g42994 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_182752g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_3552g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_478906g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g21870.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g27818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g42184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g047340.2.1 Solyc10g047340 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc11g009000.2.1 Solyc11g009000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e001875_P001 Zm00001e001875 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Zm00001e010748_P001 Zm00001e010748 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e035582_P001 Zm00001e035582 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 75 310
No external refs found!