1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g22580.2

LOC_Os03g22580.2 (LOC_Os03g22580)


Aliases : LOC_Os03g22580

Description : no hits & (original description: none)


Gene families : OG0002651 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002651_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g22580.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00195320 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AT1G02990 No alias BEST Arabidopsis thaliana protein match is: CW-type Zinc... 0.07 OrthoFinder output from all 47 species
AT3G62900 No alias CW-type Zinc Finger 0.02 OrthoFinder output from all 47 species
Aev_g43022 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11048 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043178 No alias not classified & original description: CDS=337-3933 0.02 OrthoFinder output from all 47 species
Ceric.34G045900.1 Ceric.34G045900 not classified & original description: pacid=50623623... 0.04 OrthoFinder output from all 47 species
Dac_g09109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010964001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01017765001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_16688 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp7g19200.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g38313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03272 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015972 No alias component *(Pex2) of receptor polyubiquitination system... 0.02 OrthoFinder output from all 47 species
Smo426541 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g067600.3.1 Solyc01g067600 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc09g074670.4.1 Solyc09g074670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g02902 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e035816_P001 Zm00001e035816 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR011124 Znf_CW 26 71
No external refs found!