Aliases : ATCBP80, ABH1, ENS, CBP80, LOC_Os03g22570
Description : component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)
Gene families : OG0004633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004633_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G13540 | ATCBP80, ABH1, ENS, CBP80 | ARM repeat superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Ala_g18568 | ATCBP80, ABH1, ENS, CBP80 | component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... | 0.05 | OrthoFinder output from all 47 species | |
Aop_g05374 | ATCBP80, ABH1, ENS, CBP80 | component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.38G051300.1 | ATCBP80, ABH1,... | component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... | 0.06 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021589.24 | ATCBP80, ABH1, ENS, CBP80 | RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... | 0.01 | OrthoFinder output from all 47 species | |
Cre12.g524100 | No alias | RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... | 0.06 | OrthoFinder output from all 47 species | |
Dac_g23459 | ATCBP80, ABH1, ENS, CBP80 | component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g08222 | ATCBP80, ABH1, ENS, CBP80 | component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g05053 | ATCBP80, ABH1, ENS, CBP80 | component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01037230001 | ATCBP80, ABH1, ENS, CBP80 | RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... | 0.07 | OrthoFinder output from all 47 species | |
Len_g07985 | ATCBP80, ABH1, ENS, CBP80 | component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g02038 | ATCBP80, ABH1, ENS, CBP80 | component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... | 0.03 | OrthoFinder output from all 47 species | |
MA_10436272g0010 | ATCBP80, ABH1, ENS, CBP80 | component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) | 0.05 | OrthoFinder output from all 47 species | |
Mp1g05560.1 | ATCBP80, ABH1, ENS, CBP80 | component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) | 0.1 | OrthoFinder output from all 47 species | |
Ppi_g03962 | ATCBP80, ABH1, ENS, CBP80 | component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g12525 | No alias | component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g28009 | No alias | component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... | 0.07 | OrthoFinder output from all 47 species | |
Smo115849 | ATCBP80, ABH1, ENS, CBP80 | RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g005530.3.1 | ATCBP80, ABH1,... | component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e001643_P004 | ATCBP80, ABH1,... | component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
BP | GO:0016070 | RNA metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004525 | ribonuclease III activity | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
BP | GO:0016485 | protein processing | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | HCCA |
BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0051604 | protein maturation | IEP | HCCA |
BP | GO:0071586 | CAAX-box protein processing | IEP | HCCA |
MF | GO:0106413 | dihydrouridine synthase activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
No external refs found! |