LOC_Os03g21800.1 (LOC_Os03g21800)

Aliases : LOC_Os03g21800

Description : transcription factor (bZIP)

Gene families : OG0000155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000155_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g21800.1
Cluster	HCCA: Cluster_77

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00071p00155560	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bZIP...	0.03	OrthoFinder output from all 47 species
AT2G40620	No alias	Basic-leucine zipper (bZIP) transcription factor family protein	0.03	OrthoFinder output from all 47 species
Adi_g008976	No alias	bZIP class-I transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g012566	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g016089	No alias	bZIP class-L transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g082361	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g082362	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g02174	No alias	bZIP class-L transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g03836	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g16415	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0050.g031029	No alias	bZIP class-I transcription factor & original...	0.04	OrthoFinder output from all 47 species
Cba_g07558	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g62983	ATBZIP34, BZIP34	bZIP class-L transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.09G004400.1	Ceric.09G004400	bZIP class-L transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.17G013600.1	Ceric.17G013600	not classified & original description: pacid=50617371...	0.03	OrthoFinder output from all 47 species
Dac_g04188	ATBZIP34, BZIP34	bZIP class-L transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g05678	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g10584	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g11593	ATBZIP34, BZIP34	bZIP class-L transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g02353	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g02546	No alias	bZIP class-L transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g13358	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01034897001	SUE3, VIP1	RNA biosynthesis.transcriptional activation.bZIP...	0.03	OrthoFinder output from all 47 species
Len_g35260	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g04747	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Mp3g00600.1	No alias	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
Mp7g00210.1	No alias	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Msp_g00644	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g04246	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g10276	ATBZIP34, BZIP34	bZIP class-L transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g37432	AtbZIP52, bZIP52	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g04890	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g05117	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g13333	ATBZIP34, BZIP34	bZIP class-L transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g44071	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g18152	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g24727	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g110480.4.1	Solyc01g110480	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Solyc11g020950.3.1	Solyc11g020950	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Spa_g22042	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e002183_P001	Zm00001e002183	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Zm00001e009082_P002	SUE3, VIP1,...	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Zm00001e018460_P001	SUE3, VIP1,...	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030127	COPII vesicle coat	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	134	180

External Links

No external refs found!

LOC_Os03g21800.1 (LOC_Os03g21800)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation