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  5. LOC_Os03g21040.2

LOC_Os03g21040.2 (LOC_Os03g21040)


Aliases : LOC_Os03g21040

Description : Ricin B-like lectin R40C1 OS=Oryza sativa subsp. japonica (sp|q10m12|40c1_orysj : 642.0)


Gene families : OG0000410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000410_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g21040.2

Target Alias Description ECC score Gene Family Method Actions
Adi_g084721 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g28196 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13290.t1 PHB-1D, ATHB-14,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene36366.t1 Aspi01Gene36366 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_13268 No alias Ricin B-like lectin R40G3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Len_g49271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g02400.1 No alias Ricin B-like lectin R40G3 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
Msp_g01058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05740 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g65519 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g18227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!