LOC_Os03g20600.1 (LOC_Os03g20600)


Aliases : LOC_Os03g20600

Description : no hits & (original description: none)


Gene families : OG0000329 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000329_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g20600.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00253230 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00033p00172620 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00216010 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G52342 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT5G25280 No alias serine-rich protein-related 0.05 OrthoFinder output from all 47 species
Aev_g08787 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g36962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14239.t1 Aspi01Gene14239 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20808.t1 Aspi01Gene20808 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G038200.1 Ceric.23G038200 not classified & original description: pacid=50611305... 0.02 OrthoFinder output from all 47 species
Ceric.25G031700.1 Ceric.25G031700 not classified & original description: pacid=50594457... 0.04 OrthoFinder output from all 47 species
Ceric.29G029500.1 Ceric.29G029500 not classified & original description: pacid=50625444... 0.05 OrthoFinder output from all 47 species
Ceric.32G044400.1 Ceric.32G044400 not classified & original description: pacid=50598340... 0.03 OrthoFinder output from all 47 species
Dcu_g45689 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g25886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16430 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_11274 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_37761 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g32469.1 LOC_Os02g32469 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g33110.2 LOC_Os04g33110 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g10535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_17523g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_9485570g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g01167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008383 No alias not classified & original description: CDS=1-396 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015803 No alias not classified & original description: CDS=1-222 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018211 No alias not classified & original description: CDS=434-1006 0.02 OrthoFinder output from all 47 species
Solyc07g045200.1.1 Solyc07g045200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g18214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014685_P001 Zm00001e014685 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!