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  5. LOC_Os03g19840.1

LOC_Os03g19840.1 (LOC_Os03g19840)


Aliases : LOC_Os03g19840

Description : Cysteine-rich repeat secretory protein 55 OS=Arabidopsis thaliana (sp|q9lv60|crr55_arath : 90.1)


Gene families : OG0001959 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001959_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g19840.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264250 CRK10, RLK4,... Cysteine-rich receptor-like protein kinase 10... 0.05 OrthoFinder output from all 47 species
AMTR_s00035p00082360 evm_27.TU.AmTr_v1... Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00060p00077910 evm_27.TU.AmTr_v1... Cysteine-rich repeat secretory protein 55 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00060p00079250 evm_27.TU.AmTr_v1... Cysteine-rich repeat secretory protein 55 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00036910 evm_27.TU.AmTr_v1... Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G22060 No alias Receptor-like protein kinase-related family protein 0.03 OrthoFinder output from all 47 species
AT5G48540 No alias receptor-like protein kinase-related family protein 0.05 OrthoFinder output from all 47 species
GSVIVT01005164001 CRK29 Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01005167001 CRK29 Cysteine-rich receptor-like protein kinase 29... 0.06 OrthoFinder output from all 47 species
GSVIVT01005286001 No alias Cysteine-rich repeat secretory protein 55 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01030635001 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01030637001 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01038008001 CRK26 Cysteine-rich receptor-like protein kinase 26... 0.02 OrthoFinder output from all 47 species
Gb_12661 No alias plasmodesmal protein (PDLP) 0.04 OrthoFinder output from all 47 species
LOC_Os03g16960.1 LOC_Os03g16960 Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os05g02200.1 LOC_Os05g02200 Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_113766g0010 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_114182g0010 No alias Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_128577g0010 CRK2 Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_172149g0010 CRK34 Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_18855g0020 PDLP6 Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_195678g0010 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Pir_g43413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g080060.1.1 CRK26, Solyc02g080060 Cysteine-rich receptor-like protein kinase 29... 0.03 OrthoFinder output from all 47 species
Solyc09g057960.1.1 Solyc09g057960 Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc12g005720.1.1 Solyc12g005720 Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e029633_P001 Zm00001e029633 Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR002902 GNK2 46 131
No external refs found!