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  5. LOC_Os03g19720.1

LOC_Os03g19720.1 (CP1, ATCP1, LOC_Os03g19720)


Aliases : CP1, ATCP1, LOC_Os03g19720

Description : Calcium-binding protein CP1 OS=Arabidopsis thaliana (sp|q9fdx6|cp1_arath : 94.7)


Gene families : OG0002586 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002586_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g19720.1

Target Alias Description ECC score Gene Family Method Actions
AT5G49480 CP1, ATCP1 Ca2+-binding protein 1 0.07 OrthoFinder output from all 47 species
Aev_g05732 TCH3, ATCAL4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g32875 CP1, ATCP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49551 UNE14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61644 CP1, ATCP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08743 UNE14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25877.t1 UNE14, Aspi01Gene25877 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53735.t2 UNE14, Aspi01Gene53735 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53738.t1 UNE14, Aspi01Gene53738 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53739.t2 UNE14, Aspi01Gene53739 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene53740.t1 UNE14, Aspi01Gene53740 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene53742.t1 UNE14, Aspi01Gene53742 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03544 MSS3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g48934 UNE14 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g13581 UNE14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g04795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05179 UNE14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44730 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g058720.4.1 CP1, ATCP1,... Calcium-binding protein CP1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g50847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 21 83
No external refs found!