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  5. LOC_Os03g19690.1

LOC_Os03g19690.1 (LOC_Os03g19690)


Aliases : LOC_Os03g19690

Description : no hits & (original description: none)


Gene families : OG0004055 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g19690.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00101050 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g058166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008739 No alias not classified & original description: CDS=112-2547 0.06 OrthoFinder output from all 47 species
Ceric.38G011500.1 Ceric.38G011500 not classified & original description: pacid=50580297... 0.03 OrthoFinder output from all 47 species
Cre10.g463300 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g38954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034978001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_29085 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_29086 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g04363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp4g00410.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g09912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11603 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g058730.4.1 Solyc01g058730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e001468_P001 Zm00001e001468 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!