- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : EMB2750, LOC_Os03g19650
Description : Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana (sp|q9squ6|pp216_arath : 618.0)
Gene families : OG0002119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002119_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G06430 | EMB2750 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G53170 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
| AT4G39620 | EMB2453, ATPPR5 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g05989 | EMB2453, ATPPR5 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene36337.t1 | EMB2453, ATPPR5,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.21G045800.1 | EMB2453, ATPPR5,... | not classified & original description: pacid=50604035... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g11531 | EMB2453, ATPPR5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g01190 | EMB2453, ATPPR5 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g02809 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g08087 | EMB2453, ATPPR5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01028689001 | No alias | Pentatricopeptide repeat-containing protein At5g48730,... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01032162001 | No alias | Pentatricopeptide repeat-containing protein At3g53170... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_36199 | EMB2453, ATPPR5 | Pentatricopeptide repeat-containing protein At4g39620,... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_37344 | No alias | Pentatricopeptide repeat-containing protein At5g48730,... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g27398 | EMB2453, ATPPR5 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g07398 | EMB2453, ATPPR5 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g09304 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g16720 | EMB2453, ATPPR5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0066.g016075 | No alias | not classified & original description: CDS=33-1412 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0080.g017959 | EMB2453, ATPPR5 | not classified & original description: CDS=1-1101 | 0.04 | OrthoFinder output from all 47 species | |
| Smo135826 | No alias | Pentatricopeptide repeat-containing protein At4g39620,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g006500.4.1 | Solyc01g006500 | Pentatricopeptide repeat-containing protein At5g48730,... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g12418 | EMB2453, ATPPR5 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g36742 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031052_P001 | Zm00001e031052 | Pentatricopeptide repeat-containing protein At5g48730,... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| No external refs found! |