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  5. LOC_Os03g17500.1

LOC_Os03g17500.1 (LOC_Os03g17500)


Aliases : LOC_Os03g17500

Description : no hits & (original description: none)


Gene families : OG0001308 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g17500.1

Target Alias Description ECC score Gene Family Method Actions
AT2G37300 No alias unknown protein; Has 93 Blast hits to 62 proteins in 29... 0.06 OrthoFinder output from all 47 species
Aev_g03402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g36647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01980.t1 Aspi01Gene01980 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0960.g093914 No alias not classified & original description: CDS=139-1719 0.03 OrthoFinder output from all 47 species
Dcu_g08282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g63880.1 LOC_Os01g63880 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp6g12490.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g44270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10003 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024365 No alias not classified & original description: CDS=203-1702 0.03 OrthoFinder output from all 47 species
Sam_g35499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo437902 No alias No description available 0.04 OrthoFinder output from all 47 species
Zm00001e019225_P004 Zm00001e019225 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e038447_P002 Zm00001e038447 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!