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  5. LOC_Os03g15730.1

LOC_Os03g15730.1 (SBP1, LOC_Os03g15730)


Aliases : SBP1, LOC_Os03g15730

Description : Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana (sp|q9ldd1|brg3_arath : 116.0)


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g15730.1

Target Alias Description ECC score Gene Family Method Actions
Aop_g07829 SBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.129 No alias No description available 0.02 OrthoFinder output from all 47 species
Mp2g24070.1 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!